C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8216
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117232 Gm8216-001 ENSMUSG00000084303 10090 + X:144847683-144848283 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000117232
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000117232 0.016±0.00 0.036±0.01 0.056±0.02 0.076±0.00 0.060±0.02 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A4 CIL_0007A4_0002 CGP X:144381671-145122411
CIL_000716 CIL_000716_0002 CGP X:144688907-145349089

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000463077 COMMD2-007 retained_intron Homo_sapiens 0 521
ENST00000469896 COMMD2-003 retained_intron Homo_sapiens 0 446
ENST00000473414 COMMD2-001 protein_coding Homo_sapiens 0 588
ENST00000483146 COMMD2-008 retained_intron Homo_sapiens 0 213
ENST00000483708 COMMD2-006 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000491617 COMMD2-005 nonsense_mediated_decay Homo_sapiens 0 446

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