C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396941 DCAF11-003 ENSG00000100897 9606 + 14:24115326-24124029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverPlacentaTestisENST00000396941
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Placenta Testis
ENST00000396941 3.778±0.00 7.250±0.00 4.271±0.00 5.908±0.00 4.124±0.00 24.534±12.11 35.352±0.00 4.769±0.00 6.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003F9 CIL_0003F9_0001 CGP 14:24070837-24115014
CIL_0003F6 CIL_0003F6_0001 CGP 14:24080107-24115014

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0016567 IEA protein ubiquitination
GO:0080008 IDA Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072530 Dcaf11-004 protein_coding Mus_musculus 0 1903
ENSMUST00000152681 Dcaf11-008 nonsense_mediated_decay Mus_musculus 0 1903
ENSMUST00000121622 Dcaf11-003 protein_coding Mus_musculus 0 1903
ENSMUST00000150019 Dcaf11-002 nonsense_mediated_decay Mus_musculus 0 1903
ENSMUST00000117236 Dcaf11-001 protein_coding Mus_musculus 0 1903
ENSMUST00000143375 Dcaf11-007 nonsense_mediated_decay Mus_musculus 0 1581
ENSMUST00000117701 Dcaf11-006 protein_coding Mus_musculus 0 1581
ENSMUST00000153638 Dcaf11-005 retained_intron Mus_musculus 0 1086
ENSMUST00000145983 Dcaf11-017 processed_transcript Mus_musculus 0 643
ENSMUST00000150481 Dcaf11-014 protein_coding Mus_musculus 0 508
ENSMUST00000129310 Dcaf11-018 retained_intron Mus_musculus 0 460
ENSMUST00000128490 Dcaf11-015 protein_coding Mus_musculus 0 316
ENSMUST00000143431 Dcaf11-013 protein_coding Mus_musculus 0 239
ENSMUST00000133256 Dcaf11-011 protein_coding Mus_musculus 0 239
ENSMUST00000147981 Dcaf11-009 protein_coding Mus_musculus 0 239

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