C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, beta type 6, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117520 Psmb6-ps-001 ENSMUSG00000082054 10090 - X:7950156-7950868 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000117520
Transcript ID Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000117520 0.073±0.05 0.025±0.00 0.109±0.01 0.131±0.00 0.019±0.01 0.069±0.00 0.286±0.18 0.013±0.00 0.078±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029K CIL_00029K_0002 CGP X:7930120-7978071

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270586 PSMB6-001 protein_coding Homo_sapiens 0 588
ENST00000571309 PSMB6-003 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000575643 PSMB6-004 retained_intron Homo_sapiens 9e-32 141
ENST00000614486 PSMB6-201 protein_coding Homo_sapiens 0 507

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