C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00029K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008384-ENSDARG00000059130 CGP 7955 8:7930067-8019945
GeneTranscriptPositionBiotype
ENSDARG00000008384 (hdac6)
histone deacetylase 6 		ENSDART00000104830 (hdac6-201) 7930068-7969898 protein_coding
ENSDART00000148993 (hdac6-001) 7930067-7980787 protein_coding
ENSDART00000149671 (hdac6-002) 7976790-7981022 protein_coding
ENSDARG00000059130 (gata1b)
GATA binding protein 1b 		ENSDART00000082157 (gata1b-201) 8000666-8019945 protein_coding
ENSDART00000146555 (gata1b-001) 8000543-8011629 protein_coding

Danio rerio Ensembl (Zv9)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_00029K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031161-ENSMUSG00000031162 CGP 10090 X:7930120-7978071
GeneTranscriptPositionBiotype
ENSMUSG00000031161 (Hdac6)
histone deacetylase 6 		ENSMUST00000033501 (Hdac6-201) 7930122-7947889 protein_coding
ENSMUST00000115642 (Hdac6-001) 7930120-7947889 protein_coding
ENSMUST00000133349 (Hdac6-005) 7943423-7947553 protein_coding
ENSMUST00000137499 (Hdac6-002) 7930124-7947838 retained_intron
ENSMUST00000145675 (Hdac6-003) 7931359-7947889 protein_coding
ENSMUST00000151916 (Hdac6-008) 7937322-7938672 retained_intron
ENSMUST00000153788 (Hdac6-009) 7931555-7934485 retained_intron
ENSMUST00000154200 (Hdac6-006) 7943399-7947159 retained_intron
ENSMUST00000154244 (Hdac6-004) 7946994-7947767 protein_coding
ENSMUST00000156127 (Hdac6-007) 7937429-7939964 retained_intron
ENSMUSG00000031162 (Gata1)
GATA binding protein 1 		ENSMUST00000033502 (Gata1-001) 7959260-7967910 protein_coding
ENSMUST00000125418 (Gata1-002) 7962440-7978071 protein_coding
ENSMUST00000128449 (Gata1-003) 7963029-7964166 protein_coding
ENSMUSG00000082054 (Psmb6-ps)
proteasome (prosome, macropain) subunit, beta type 6, pseudogene 		ENSMUST00000117520 (Psmb6-ps-001) 7950156-7950868 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029K_0001ENSDARG00000008384ENSDART00000104830ENSDART00000148993ENSDART00000149671ENSDARG00000059130ENSDART00000082157ENSDART00000146555CIL_00029K_0002ENSMUSG00000031161ENSMUST00000033501ENSMUST00000115642ENSMUST00000133349ENSMUST00000137499ENSMUST00000145675ENSMUST00000151916ENSMUST00000153788ENSMUST00000154200ENSMUST00000154244ENSMUST00000156127ENSMUSG00000031162ENSMUST00000033502ENSMUST00000125418ENSMUST00000128449ENSMUSG00000082054ENSMUST00000117520
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029K_0001ENSDARG00000008384ENSDART00000104830ENSDART00000148993ENSDARG00000059130ENSDART00000082157ENSDART00000146555CIL_00029K_0002ENSMUSG00000031161ENSMUST00000033501ENSMUST00000115642ENSMUST00000137499ENSMUST00000151916ENSMUSG00000031162ENSMUST00000033502ENSMUST00000125418ENSMUST00000128449ENSMUSG00000082054ENSMUST00000117520
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008384 ENSDART00000104830 N/A N/A N/A 1.781±0.75 N/A N/A 4.001±2.90 0.924±0.00 N/A N/A 0.644±0.00 N/A N/A N/A
ENSDART00000148993 N/A N/A N/A 2.340±0.97 N/A N/A 2.846±0.08 3.019±0.00 0.180±0.00 N/A 0.522±0.00 N/A N/A N/A
ENSDART00000149671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059130 ENSDART00000082157 N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146555 N/A N/A N/A 0.213±0.10 N/A N/A 0.076±0.00 N/A 0.041±0.00 N/A 0.066±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031161 ENSMUST00000033501 2.792±1.44 5.107±2.63 2.427±1.11 8.618±3.77 2.506±0.00 2.398±0.97 1.306±0.26 7.992±2.07 2.353±0.54 1.566±0.60 1.212±0.40 3.923±0.94 9.864±7.04 6.328±1.28
ENSMUST00000115642 7.561±2.19 5.879±2.24 3.306±0.98 13.427±8.83 7.436±2.48 5.448±1.17 3.076±0.27 15.607±3.53 4.886±1.57 3.914±0.61 0.917±0.48 17.018±8.29 10.822±6.01 10.954±4.92
ENSMUST00000133349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137499 1.870±0.23 N/A N/A 2.021±0.00 1.618±0.07 1.025±0.06 0.462±0.00 N/A 0.792±0.00 1.028±0.16 N/A 2.317±0.52 3.285±1.31 2.741±0.13
ENSMUST00000145675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.403±0.00
ENSMUST00000153788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031162 ENSMUST00000033502 0.234±0.15 0.415±0.34 0.106±0.02 0.117±0.02 0.587±0.06 0.037±0.02 0.113±0.05 0.031±0.01 53.672±48.10 0.599±0.22 N/A 1.391±0.98 4.405±2.47 2.921±1.25
ENSMUST00000125418 N/A 0.375±0.43 N/A N/A N/A N/A N/A 0.078±0.04 N/A 0.281±0.00 N/A 3.559±0.95 N/A N/A
ENSMUST00000128449 N/A 0.375±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082054 ENSMUST00000117520 N/A N/A 0.073±0.05 0.025±0.00 N/A 0.109±0.01 N/A 0.131±0.00 0.019±0.01 0.069±0.00 N/A 0.286±0.18 0.013±0.00 0.078±0.02

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