C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117566 Fgf1-007 ENSMUSG00000036585 10090 - 18:38841907-38858748 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000117566
Transcript ID Testis
ENSMUST00000117566 0.546±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W6 CIL_0007W6_0002 VISTA 18:38503792-39105763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001759 IDA organ induction
GO:0001934 IDA positive regulation of protein phosphorylation
GO:0005104 IEA fibroblast growth factor receptor binding
GO:0005576 IDA extracellular region
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0008083 IEA growth factor activity
GO:0008543 IEA fibroblast growth factor receptor signaling pathway
GO:0030324 IDA lung development
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0050679 IDA positive regulation of epithelial cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337706 FGF1-002 protein_coding Homo_sapiens 0 268
ENST00000359370 FGF1-001 protein_coding Homo_sapiens 0 268
ENST00000360966 FGF1-007 protein_coding Homo_sapiens 0 508
ENST00000378046 FGF1-008 protein_coding Homo_sapiens 0 268
ENST00000394496 FGF1-004 protein_coding Homo_sapiens 0 244
ENST00000407758 FGF1-009 protein_coding Homo_sapiens 0 268
ENST00000419524 FGF1-010 protein_coding Homo_sapiens 0 268
ENST00000441680 FGF1-006 protein_coding Homo_sapiens 0 268
ENST00000489937 FGF1-003 retained_intron Homo_sapiens 0 508
ENST00000494344 FGF1-012 retained_intron Homo_sapiens 0 268
ENST00000494579 FGF1-011 processed_transcript Homo_sapiens 0 268
ENST00000610990 FGF1-201 protein_coding Homo_sapiens 0 268
ENST00000612258 FGF1-202 protein_coding Homo_sapiens 0 268
ENST00000619447 FGF1-203 protein_coding Homo_sapiens 0 268
ENST00000621536 FGF1-204 protein_coding Homo_sapiens 0 268

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