C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5510
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117826 Gm5510-001 ENSMUSG00000083458 10090 + 19:6152715-6153200 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117826
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117826 0.647±0.53 0.224±0.07 0.828±0.00 0.552±0.00 1.003±0.28 0.273±0.20 0.334±0.18 0.227±0.15 0.277±0.21 0.097±0.00 0.137±0.00 0.299±0.01 0.044±0.00 0.149±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278671 LAMTOR1-001 protein_coding Homo_sapiens 0 665
ENST00000535872 LAMTOR1-002 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000538404 LAMTOR1-004 protein_coding Homo_sapiens 0 536
ENST00000539797 LAMTOR1-007 processed_transcript Homo_sapiens 0 614
ENST00000544594 LAMTOR1-003 protein_coding Homo_sapiens 4e-31 139
ENST00000545249 LAMTOR1-006 protein_coding Homo_sapiens 0 536

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