C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HemK methyltransferase family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434410 HEMK1-001 ENSG00000114735 9606 + 3:50569152-50596168 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000434410
Transcript ID Adipose Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000434410 0.116±0.00 0.352±0.00 0.322±0.00 0.478±0.00 0.178±0.00 0.239±0.00 0.125±0.05 0.749±0.25 0.170±0.00 0.695±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0001 VISTA 3:50299047-50902727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0006306 IEA DNA methylation
GO:0006479 IEA protein methylation
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0008170 IEA N-methyltransferase activity
GO:0008276 IEA protein methyltransferase activity
GO:0031167 IEA rRNA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035196 Hemk1-001 protein_coding Mus_musculus 0 944
ENSMUST00000148165 Hemk1-002 retained_intron Mus_musculus 0 782
ENSMUST00000118051 Hemk1-005 protein_coding Mus_musculus 0 353
ENSMUST00000128895 Hemk1-003 retained_intron Mus_musculus 0 348
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000001 69
ENSMUST00000108492 Hif3a-002 protein_coding Mus_musculus 0.000002 62
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000002 62
ENSMUST00000146436 Accs-004 retained_intron Mus_musculus 0.00002 58
ENSMUST00000191494 Dstyk-008 retained_intron Mus_musculus 0.00002 58

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