C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | genetic suppressor element 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000118136  |
Gse1-001 |
ENSMUSG00000031822 |
10090 | + |
8:120537429-120579326  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008MT | CIL_0008MT_0002 | VISTA | 8:119992012-120594793 |
| CIL_0008HO | CIL_0008HO_0002 | VISTA | 8:120070900-120672676 |
| CIL_0000IQ | CIL_0000IQ_0002 | CGP | 8:120166397-120581390 |
| CIL_0008HH | CIL_0008HH_0002 | VISTA | 8:120216454-120817853 |
| CIL_000579 | CIL_000579_0003 | CGP | 8:120230536-120589304 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000253458
|
GSE1-002 | protein_coding | Homo_sapiens | 0 | 4148 |
|
ENST00000393243
|
GSE1-001 | protein_coding | Homo_sapiens | 0 | 3663 |
|
ENST00000405402
|
GSE1-003 | protein_coding | Homo_sapiens | 0 | 3663 |
|
ENST00000412692
|
GSE1-005 | protein_coding | Homo_sapiens | 0 | 2130 |
|
ENST00000438180
|
GSE1-011 | protein_coding | Homo_sapiens | 0 | 1085 |
|
ENST00000469381
|
GSE1-004 | retained_intron | Homo_sapiens | 0 | 1079 |
|
ENST00000471070
|
GSE1-010 | processed_transcript | Homo_sapiens | 0 | 350 |
|
ENST00000479488
|
GSE1-007 | retained_intron | Homo_sapiens | 0 | 387 |
|
ENST00000562659
|
GSE1-012 | retained_intron | Homo_sapiens | 0 | 503 |
