C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 1826
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118646 Gm1826-001 ENSMUSG00000082028 10090 + 2:87393483-87394644 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000118646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118646 0.743±0.20 1.421±0.37 0.175±0.04 0.158±0.13 0.410±0.22 0.317±0.12 0.192±0.08 0.388±0.10 0.392±0.33 0.536±0.10 1.702±0.90 0.064±0.03 0.430±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269137 SS18-001 protein_coding Homo_sapiens 0 1458
ENST00000269138 SS18-007 nonsense_mediated_decay Homo_sapiens 0 880
ENST00000415083 SS18-003 protein_coding Homo_sapiens 0 1140
ENST00000539244 SS18-006 nonsense_mediated_decay Homo_sapiens 0 1003
ENST00000542420 SS18-002 protein_coding Homo_sapiens 0 1090
ENST00000577572 SS18-011 nonsense_mediated_decay Homo_sapiens 9e-31 137
ENST00000577636 SS18-026 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000577751 SS18-008 processed_transcript Homo_sapiens 0 217
ENST00000578595 SS18-021 processed_transcript Homo_sapiens 5e-17 92
ENST00000578700 SS18-010 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000578954 SS18-014 nonsense_mediated_decay Homo_sapiens 0 562
ENST00000579061 SS18-024 protein_coding Homo_sapiens 0 623
ENST00000579640 SS18-004 nonsense_mediated_decay Homo_sapiens 0 1321
ENST00000580642 SS18-019 nonsense_mediated_decay Homo_sapiens 3e-31 139
ENST00000580751 SS18-018 nonsense_mediated_decay Homo_sapiens 9e-31 137
ENST00000581021 SS18-022 protein_coding Homo_sapiens 0 276
ENST00000581570 SS18-016 nonsense_mediated_decay Homo_sapiens 1e-30 137
ENST00000582448 SS18-009 nonsense_mediated_decay Homo_sapiens 3e-16 90
ENST00000582792 SS18-017 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000584083 SS18-023 protein_coding Homo_sapiens 0 531
ENST00000585121 SS18-005 nonsense_mediated_decay Homo_sapiens 0 1321
ENST00000585241 SS18-025 processed_transcript Homo_sapiens 0 571

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