C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synovial sarcoma translocation, chromosome 18 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000581570  |
SS18-016 |
ENSG00000141380 |
9606 | - |
18:26057732-26090608  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007LU | CIL_0007LU_0001 | UCNEbase | 18:24628254-26687255 |
| CIL_0008CS | CIL_0008CS_0001 | VISTA | 18:25552759-26154861 |
| CIL_0006ET | CIL_0006ET_0001 | CGP | 18:26016253-26193355 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000040924
|
Ss18-201 | protein_coding | Mus_musculus | 0 | 198 |
|
ENSMUST00000092041
|
Ss18-203 | protein_coding | Mus_musculus | 0 | 198 |
|
ENSMUST00000040964
|
Ss18-202 | protein_coding | Mus_musculus | 9.80909e-45 | 183 |
|
ENSMUST00000118646
|
Gm1826-001 | processed_pseudogene | Mus_musculus | 1e-30 | 137 |
