C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13552
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118837 Gm13552-001 ENSMUSG00000081157 10090 - 2:59564268-59564684 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118837
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118837 1.740±0.81 0.607±0.36 0.075±0.02 0.394±0.37 1.406±0.38 0.710±0.57 0.469±0.19 0.551±0.27 0.909±1.25 0.543±0.17 0.291±0.13 2.625±1.78 0.028±0.01 0.751±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083G CIL_00083G_0002 VISTA 2:59262344-59863132
CIL_0007X8 CIL_0007X8_0002 VISTA 2:59297936-59901449
CIL_0008PS CIL_0008PS_0002 VISTA 2:59368906-59972125
CIL_0005U4 CIL_0005U4_0002 CGP 2:59484653-59846149
CIL_0008P7 CIL_0008P7_0002 VISTA 2:59528773-60129361

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259873 MRPS18B-001 protein_coding Homo_sapiens 0 385
ENST00000327800 MRPS18B-001 protein_coding Homo_sapiens 0 385
ENST00000412451 MRPS18B-001 protein_coding Homo_sapiens 0 385
ENST00000426945 MRPS18B-001 protein_coding Homo_sapiens 0 385
ENST00000430402 MRPS18B-001 protein_coding Homo_sapiens 0 385
ENST00000451032 MRPS18B-001 protein_coding Homo_sapiens 0 385
ENST00000454427 MRPS18B-001 protein_coding Homo_sapiens 0 385
ENST00000460640 MRPS18B-002 retained_intron Homo_sapiens 0 385
ENST00000464426 MRPS18B-002 retained_intron Homo_sapiens 0 385
ENST00000468755 MRPS18B-005 processed_transcript Homo_sapiens 0 385
ENST00000469397 MRPS18B-005 processed_transcript Homo_sapiens 0 385
ENST00000469706 MRPS18B-002 retained_intron Homo_sapiens 0 385
ENST00000472229 MRPS18B-005 processed_transcript Homo_sapiens 0 385
ENST00000472267 MRPS18B-002 retained_intron Homo_sapiens 0 385
ENST00000472444 MRPS18B-005 processed_transcript Homo_sapiens 0 385
ENST00000476123 MRPS18B-002 retained_intron Homo_sapiens 0 385
ENST00000477010 MRPS18B-005 processed_transcript Homo_sapiens 0 385
ENST00000481158 MRPS18B-002 retained_intron Homo_sapiens 0 385
ENST00000489289 MRPS18B-005 processed_transcript Homo_sapiens 0 385
ENST00000493769 MRPS18B-005 processed_transcript Homo_sapiens 0 385
ENST00000498459 MRPS18B-002 retained_intron Homo_sapiens 0 385

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