C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mitochondrial ribosomal protein S18B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472229 MRPS18B-005 ENSG00000204568 9606 + 6:30617860-30626395 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENST00000472229
Transcript ID Brain Placenta
ENST00000472229 2.055±0.00 6.265±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784
CIL_0001FO CIL_0001FO_0002 CGP 6:30600400-30626395

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025305 Mrps18b-001 protein_coding Mus_musculus 0 586
ENSMUST00000173737 Mrps18b-006 retained_intron Mus_musculus 0 387
ENSMUST00000113782 Mrps18b-002 protein_coding Mus_musculus 0 387
ENSMUST00000118837 Gm13552-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000174807 Mrps18b-005 protein_coding Mus_musculus 0 278
ENSMUST00000174349 Mrps18b-003 protein_coding Mus_musculus 5e-32 143
ENSMUST00000174574 Mrps18b-007 retained_intron Mus_musculus 7e-16 90
ENSMUST00000172642 Mrps18b-004 protein_coding Mus_musculus 7e-16 90
ENSMUST00000173792 Mrps18b-008 processed_transcript Mus_musculus 0.000000000000002 88

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