C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility 2, M region locus 6, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119193 H2-M6-ps-001 ENSMUSG00000083534 10090 - 17:36969195-36971396 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119193
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119193 0.089±0.05 0.055±0.00 0.160±0.11 1.052±0.02 0.132±0.07 0.083±0.03 0.053±0.01 0.064±0.04 0.064±0.02 0.195±0.08 0.330±0.10 0.126±0.02 0.068±0.00 1.020±0.79

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360323 HLA-G-001 protein_coding Homo_sapiens 0 255
ENST00000376630 HLA-E-001 protein_coding Homo_sapiens 0 239
ENST00000376818 HLA-G-004 protein_coding Homo_sapiens 0 255
ENST00000376828 HLA-G-002 protein_coding Homo_sapiens 0 255
ENST00000383597 HLA-E-001 protein_coding Homo_sapiens 0 239
ENST00000383621 HLA-G-001 protein_coding Homo_sapiens 0 255
ENST00000383623 HLA-G-004 protein_coding Homo_sapiens 0 255
ENST00000400665 HLA-G-002 protein_coding Homo_sapiens 0 255
ENST00000400682 HLA-G-002 protein_coding Homo_sapiens 0 255
ENST00000412263 HLA-G-004 protein_coding Homo_sapiens 0 255
ENST00000415289 HLA-E-001 protein_coding Homo_sapiens 0 239
ENST00000415649 HLA-E-001 protein_coding Homo_sapiens 0 239
ENST00000420559 HLA-G-002 protein_coding Homo_sapiens 0 255
ENST00000422371 HLA-G-002 protein_coding Homo_sapiens 0 255
ENST00000423011 HLA-G-001 protein_coding Homo_sapiens 0 255
ENST00000423373 HLA-G-001 protein_coding Homo_sapiens 0 255
ENST00000425603 HLA-E-001 protein_coding Homo_sapiens 0 239
ENST00000426863 HLA-G-004 protein_coding Homo_sapiens 0 255
ENST00000427936 HLA-E-001 protein_coding Homo_sapiens 0 239
ENST00000428701 HLA-G-201 protein_coding Homo_sapiens 0 255
ENST00000428952 HLA-G-001 protein_coding Homo_sapiens 0 255
ENST00000428988 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 215
ENST00000430151 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 209
ENST00000430253 HLA-G-005 protein_coding Homo_sapiens 0 255
ENST00000431463 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 222
ENST00000434881 HLA-G-002 protein_coding Homo_sapiens 0 255
ENST00000434907 HLA-G-004 protein_coding Homo_sapiens 0 255
ENST00000435780 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 213
ENST00000444098 HLA-G-001 protein_coding Homo_sapiens 0 255
ENST00000444683 HLA-E-001 protein_coding Homo_sapiens 0 239
ENST00000449127 HLA-G-001 protein_coding Homo_sapiens 0 255
ENST00000450984 HLA-G-002 protein_coding Homo_sapiens 0 255
ENST00000452577 HLA-G-004 protein_coding Homo_sapiens 0 255
ENST00000452715 HLA-G-004 protein_coding Homo_sapiens 0 255
ENST00000459768 HLA-G-003 retained_intron Homo_sapiens 0 255
ENST00000466488 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000467814 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000469347 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000469472 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000478108 HLA-G-003 retained_intron Homo_sapiens 0 255
ENST00000478355 HLA-G-003 retained_intron Homo_sapiens 0 255
ENST00000478519 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000480953 HLA-G-003 retained_intron Homo_sapiens 0 255
ENST00000484755 HLA-G-003 retained_intron Homo_sapiens 0 255
ENST00000486553 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000491141 HLA-G-003 retained_intron Homo_sapiens 0 255
ENST00000494247 HLA-G-003 retained_intron Homo_sapiens 0 255
ENST00000546545 HLA-G-203 protein_coding Homo_sapiens 0 255
ENST00000546634 HLA-G-205 protein_coding Homo_sapiens 0 255
ENST00000547241 HLA-G-204 protein_coding Homo_sapiens 0 255
ENST00000547931 HLA-G-207 protein_coding Homo_sapiens 0 255
ENST00000550897 HLA-G-206 protein_coding Homo_sapiens 0 255
ENST00000553052 HLA-G-202 protein_coding Homo_sapiens 0 255
ENST00000612360 HLA-G-004 protein_coding Homo_sapiens 0 250
ENST00000612468 HLA-E-201 protein_coding Homo_sapiens 0 239
ENST00000612643 HLA-E-207 protein_coding Homo_sapiens 0 239
ENST00000615098 HLA-G-001 protein_coding Homo_sapiens 0 250
ENST00000615464 HLA-G-002 protein_coding Homo_sapiens 0 250
ENST00000615789 HLA-G-003 retained_intron Homo_sapiens 0 250
ENST00000616124 HLA-E-202 protein_coding Homo_sapiens 0 239
ENST00000617749 HLA-E-205 protein_coding Homo_sapiens 0 239
ENST00000618039 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000618812 HLA-G-208 protein_coding Homo_sapiens 0 250
ENST00000618827 HLA-E-206 protein_coding Homo_sapiens 0 239
ENST00000620537 HLA-E-203 protein_coding Homo_sapiens 0 239
ENST00000621113 HLA-E-204 protein_coding Homo_sapiens 0 239

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