C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6630
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119199 Gm6630-001 ENSMUSG00000084299 10090 + 16:23179556-23180009 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119199
Transcript ID Adipose Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119199 0.102±0.00 0.153±0.19 0.299±0.00 0.144±0.05 0.035±0.02 0.130±0.01 0.148±0.02 0.182±0.00 0.107±0.07 0.219±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LA CIL_0008LA_0002 VISTA 16:22937415-23544553

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017975 rps18-001 protein_coding Danio_rerio 0 196
ENSDART00000142769 rps18-002 protein_coding Danio_rerio 0 195
ENSDART00000143134 rps18-003 protein_coding Danio_rerio 0 195
ENSDART00000131839 rps18-005 protein_coding Danio_rerio 2e-32 143
ENSDART00000134350 rps18-004 retained_intron Danio_rerio 6e-32 141

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