C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 4D, cAMP specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119507 Pde4d-007 ENSMUSG00000021699 10090 + 13:109442183-109951364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLungOvaryTestisENSMUST00000119507
Transcript ID Adrenal Brain Breast Colon Kidney Lung Ovary Testis
ENSMUST00000119507 1.508±0.19 8.034±3.95 3.016±0.00 4.702±0.79 4.701±1.36 1.785±0.00 1.415±0.29 0.315±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0006198 IMP cAMP catabolic process
GO:0006939 IMP smooth muscle contraction
GO:0007165 IEA signal transduction
GO:0007568 IMP aging
GO:0030593 IMP neutrophil chemotaxis
GO:0035264 IMP multicellular organism growth
GO:0046872 IEA metal ion binding
GO:0050900 IMP leukocyte migration
GO:0071222 IMP cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000002096 pde4ca-201 protein_coding Danio_rerio 0 797
ENSDART00000141030 pde4ca-001 protein_coding Danio_rerio 0 797
ENST00000309641 PDE4D-013 nonsense_mediated_decay Homo_sapiens 0 1790
ENST00000317118 PDE4D-020 protein_coding Homo_sapiens 0 1869
ENST00000340635 PDE4D-001 protein_coding Homo_sapiens 0 2588
ENST00000358923 PDE4D-019 protein_coding Homo_sapiens 0 2069
ENST00000360047 PDE4D-014 protein_coding Homo_sapiens 0 2785
ENST00000405053 PDE4D-002 processed_transcript Homo_sapiens 0 521
ENST00000405755 PDE4D-015 protein_coding Homo_sapiens 0 2588
ENST00000502484 PDE4D-003 protein_coding Homo_sapiens 0 2588
ENST00000502575 PDE4D-011 protein_coding Homo_sapiens 0 525
ENST00000503258 PDE4D-016 protein_coding Homo_sapiens 0 2590
ENST00000505453 PDE4D-017 protein_coding Homo_sapiens 0 1792
ENST00000507116 PDE4D-012 protein_coding Homo_sapiens 0 2591
ENST00000514231 PDE4D-025 retained_intron Homo_sapiens 0 291
ENST00000515011 PDE4D-018 retained_intron Homo_sapiens 0 2073
ENST00000515324 PDE4D-024 processed_transcript Homo_sapiens 0 470
ENST00000546160 PDE4D-201 protein_coding Homo_sapiens 0 2590
ENST00000621323 PDE4D-026 processed_transcript Homo_sapiens 0 520

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