C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11198
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119771 Gm11198-001 ENSMUSG00000082304 10090 - 11:79371257-79372230 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000119771
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000119771 0.129±0.10 0.161±0.08 0.114±0.00 0.140±0.07 0.221±0.11 0.105±0.03 0.106±0.05 0.090±0.04 0.050±0.03 0.194±0.03 0.306±0.19 0.102±0.00 0.130±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GN CIL_0004GN_0003 CGP 11:79339693-79581612

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 787
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 785
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 787
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 787
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 590
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 523
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 590
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 730
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 514
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 774

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