C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12848
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119777 Gm12848-001 ENSMUSG00000082043 10090 + 4:115652389-115653480 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaENSMUST00000119777
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000119777 0.087±0.04 0.101±0.00 0.051±0.01 0.154±0.07 0.068±0.02 0.135±0.09 0.038±0.02 0.165±0.03 0.470±0.36 0.065±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317198 EEF1D-201 protein_coding Homo_sapiens 0 785
ENST00000395119 EEF1D-002 protein_coding Homo_sapiens 0 785
ENST00000419152 EEF1D-202 protein_coding Homo_sapiens 0 785
ENST00000423316 EEF1D-203 protein_coding Homo_sapiens 0 785
ENST00000431410 EEF1DP5-001 processed_pseudogene Homo_sapiens 0 268
ENST00000442189 EEF1D-001 protein_coding Homo_sapiens 0 785
ENST00000449232 RP11-374C13.1-001 processed_pseudogene Homo_sapiens 0 244
ENST00000524397 EEF1D-012 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000524624 EEF1D-053 protein_coding Homo_sapiens 0 580
ENST00000526786 EEF1D-025 retained_intron Homo_sapiens 0 518
ENST00000527741 EEF1D-008 retained_intron Homo_sapiens 5e-16 92
ENST00000528610 EEF1D-004 protein_coding Homo_sapiens 0 580
ENST00000529007 EEF1D-009 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000529272 EEF1D-006 protein_coding Homo_sapiens 0 785
ENST00000530191 EEF1D-032 protein_coding Homo_sapiens 0 518
ENST00000530445 EEF1D-017 protein_coding Homo_sapiens 0 451
ENST00000530616 EEF1D-011 protein_coding Homo_sapiens 0 370
ENST00000530848 EEF1D-018 retained_intron Homo_sapiens 0 296
ENST00000531218 EEF1D-046 protein_coding Homo_sapiens 0 510
ENST00000532741 EEF1D-007 protein_coding Homo_sapiens 0 785
ENST00000533204 EEF1D-047 protein_coding Homo_sapiens 0 518
ENST00000533494 EEF1D-045 protein_coding Homo_sapiens 0 451
ENST00000533749 EEF1D-052 protein_coding Homo_sapiens 0 355
ENST00000533833 EEF1D-010 nonsense_mediated_decay Homo_sapiens 7e-39 165
ENST00000534377 EEF1D-049 protein_coding Homo_sapiens 0 337
ENST00000534380 EEF1D-048 protein_coding Homo_sapiens 0 693
ENST00000614575 EEF1D-205 protein_coding Homo_sapiens 0 580
ENST00000615067 EEF1D-206 protein_coding Homo_sapiens 0 785
ENST00000615698 EEF1D-207 protein_coding Homo_sapiens 0 785
ENST00000618139 EEF1D-204 protein_coding Homo_sapiens 0 708
ENST00000619144 EEF1D-208 protein_coding Homo_sapiens 0 785
ENST00000619198 EEF1D-209 protein_coding Homo_sapiens 0 708
ENST00000620155 EEF1D-210 protein_coding Homo_sapiens 0 785

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