C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5406
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120054 Gm5406-001 ENSMUSG00000080715 10090 + 16:45411580-45412345 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastLiverPlacentaTestisENSMUST00000120054
Transcript ID Bladder Breast Liver Placenta Testis
ENSMUST00000120054 0.089±0.00 0.177±0.11 0.096±0.07 0.066±0.04 0.064±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216455 PSMA3-001 protein_coding Homo_sapiens 0 952
ENST00000412908 PSMA3-002 protein_coding Homo_sapiens 0 833
ENST00000553665 PSMA3-008 retained_intron Homo_sapiens 0 508
ENST00000554812 PSMA3-006 retained_intron Homo_sapiens 0 701
ENST00000555743 PSMA3-016 retained_intron Homo_sapiens 0 728
ENST00000555931 PSMA3-011 nonsense_mediated_decay Homo_sapiens 0 614
ENST00000556321 PSMA3-015 retained_intron Homo_sapiens 0 300
ENST00000557508 PSMA3-013 protein_coding Homo_sapiens 0 822

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