C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557508 PSMA3-013 ENSG00000100567 9606 + 14:58244904-58272007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyOvaryTestisENST00000557508
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Ovary Testis
ENST00000557508 15.089±0.00 38.446±0.00 12.163±0.19 17.993±0.00 8.454±0.00 49.973±0.00 32.687±0.00 12.378±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022F CIL_00022F_0001 CGP 14:57563922-58298139
CIL_0001K7 CIL_0001K7_0001 CGP 14:58200080-58272012
CIL_0004LX CIL_0004LX_0001 CGP 14:58244831-58373887

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005839 IEA proteasome core complex
GO:0051603 IEA proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160864 Psma3-007 protein_coding Mus_musculus 0 970
ENSMUST00000118459 Gm13835-001 processed_pseudogene Mus_musculus 0 961
ENSMUST00000160027 Psma3-001 protein_coding Mus_musculus 0 933
ENSMUST00000162626 Psma3-002 nonsense_mediated_decay Mus_musculus 0 931
ENSMUST00000071704 Psma3-005 nonsense_mediated_decay Mus_musculus 0 926
ENSMUST00000120054 Gm5406-001 processed_pseudogene Mus_musculus 0 822
ENSMUST00000160683 Psma3-004 retained_intron Mus_musculus 0 625
ENSMUST00000162851 Psma3-008 nonsense_mediated_decay Mus_musculus 0 420
ENSDART00000130105 psma3-001 protein_coding Danio_rerio 0 361
ENSMUST00000163035 Psma3-006 retained_intron Mus_musculus 0 309
ENSMUST00000162898 Psma3-009 protein_coding Mus_musculus 0.000000000003 77

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