C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C2 calcium-dependent domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120196 C2cd3-007 ENSMUSG00000047248 10090 + 7:100430150-100470152 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLungMuscleOvaryPlacentaENSMUST00000120196
Transcript ID Adrenal Bladder Brain Breast Colon Lung Muscle Ovary Placenta
ENSMUST00000120196 1.210±0.25 1.278±0.00 3.533±0.00 1.574±0.00 1.386±0.31 1.624±0.12 0.649±0.00 2.194±0.63 0.758±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001947 IMP heart looping
GO:0005515 IPI protein binding
GO:0005814 IDA centriole
GO:0007389 IMP pattern specification process
GO:0007420 IMP brain development
GO:0008589 IGI regulation of smoothened signaling pathway
GO:0016485 IMP protein processing
GO:0021915 IMP neural tube development
GO:0021997 IMP neural plate axis specification
GO:0030162 IDA regulation of proteolysis
GO:0030326 IMP embryonic limb morphogenesis
GO:0034451 IDA centriolar satellite
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0042733 IMP embryonic digit morphogenesis
GO:0071539 IMP protein localization to centrosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313663 C2CD3-001 protein_coding Homo_sapiens 0 1969
ENST00000334126 C2CD3-201 protein_coding Homo_sapiens 0 2338
ENST00000414160 C2CD3-005 protein_coding Homo_sapiens 0 1969
ENST00000442398 C2CD3-006 nonsense_mediated_decay Homo_sapiens 0 1816
ENST00000535645 C2CD3-014 processed_transcript Homo_sapiens 0 616
ENST00000538361 C2CD3-016 protein_coding Homo_sapiens 0 209
ENST00000538625 C2CD3-017 processed_transcript Homo_sapiens 0 621

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