C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 1 (chaperonin 10), pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120275 Hspe1-ps6-001 ENSMUSG00000083880 10090 - 4:96072424-96072706 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000120275
Transcript ID Brain Ovary Testis
ENSMUST00000120275 4.569±0.00 0.283±0.00 3.158±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N0 CIL_0008N0_0002 VISTA 4:95521063-96123802
CIL_000052 CIL_000052_0003 CGP 4:95967240-96077546
CIL_0004F6 CIL_0004F6_000C CGP 4:96027534-96141152

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233893 HSPE1-001 protein_coding Homo_sapiens 0 291
ENST00000339579 HSPE1P11-001 processed_pseudogene Homo_sapiens 0 224
ENST00000409468 HSPE1-004 protein_coding Homo_sapiens 0.0000000000006 79
ENST00000409729 HSPE1-002 protein_coding Homo_sapiens 2e-32 143
ENST00000421494 HSPE1P1-001 processed_pseudogene Homo_sapiens 1.4013e-45 185
ENST00000426640 HSPE1P16-001 processed_pseudogene Homo_sapiens 3e-18 95
ENST00000438283 HSPE1P21-001 processed_pseudogene Homo_sapiens 2e-30 135
ENST00000463841 HSPE1-005 retained_intron Homo_sapiens 0.0000000000007 79
ENST00000465573 HSPE1-007 processed_transcript Homo_sapiens 2e-32 143
ENST00000479457 HSPE1P6-001 processed_pseudogene Homo_sapiens 0 195
ENST00000508631 HSPE1P10-001 processed_pseudogene Homo_sapiens 0.00001 55
ENST00000559254 HSPE1P3-001 processed_pseudogene Homo_sapiens 0 246
ENST00000604681 HSPE1P7-001 processed_pseudogene Homo_sapiens 0 248
ENST00000605812 HSPE1P14-001 processed_pseudogene Homo_sapiens 3.99931e-42 174

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