C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-stimulated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120331 Isg20-004 ENSMUSG00000039236 10090 + 7:78914235-78920349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000120331
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000120331 3.681±1.00 1.857±0.62 0.224±0.06 3.864±1.22 11.643±2.07 15.188±12.69 2.165±0.58 22.735±23.58 18.133±9.74 0.542±0.10 15.843±5.71 54.807±4.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011F CIL_00011F_0002 CGP 7:78895854-78920362
CIL_00011K CIL_00011K_0002 CGP 7:78913424-79115099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004527 ISS exonuclease activity
GO:0005634 ISS nucleus
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006364 IEA rRNA processing
GO:0008859 IEA exoribonuclease II activity
GO:0015030 ISS Cajal body
GO:0030619 ISS U1 snRNA binding
GO:0030620 ISS U2 snRNA binding
GO:0034511 ISS U3 snoRNA binding
GO:0045087 IEA innate immune response
GO:0046872 IEA metal ion binding
GO:0051607 ISS defense response to virus
GO:0090503 IEA RNA phosphodiester bond hydrolysis, exonucleolytic

Homologs

No Homologs available.

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