C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannose-6-phosphate receptor, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120481 M6pr-ps-001 ENSMUSG00000080832 10090 + 3:99500550-99501379 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000120481
Transcript ID Adipose Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120481 0.050±0.00 0.077±0.00 0.047±0.00 0.079±0.03 0.081±0.07 0.105±0.02 0.217±0.00 0.007±0.00 0.067±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RV CIL_0007RV_0002 VISTA 3:98932927-99536556
CIL_0008QB CIL_0008QB_0002 VISTA 3:98959779-99563564
CIL_0008CA CIL_0008CA_0002 VISTA 3:99030606-99631569
CIL_0008T7 CIL_0008T7_0002 VISTA 3:99365315-99967144

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000000412 M6PR-001 protein_coding Homo_sapiens 0 941
ENST00000536844 M6PR-201 protein_coding Homo_sapiens 0 494
ENST00000537621 M6PR-009 protein_coding Homo_sapiens 0 420
ENST00000540837 M6PR-006 retained_intron Homo_sapiens 0 350
ENST00000541507 M6PR-002 nonsense_mediated_decay Homo_sapiens 0 346
ENST00000543159 M6PR-005 protein_coding Homo_sapiens 0 267
ENST00000543258 M6PR-007 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000543704 M6PR-011 protein_coding Homo_sapiens 0.000000000000004 86
ENST00000543834 M6PR-008 retained_intron Homo_sapiens 0 394
ENST00000543845 M6PR-004 protein_coding Homo_sapiens 0 326
ENST00000544245 M6PR-003 protein_coding Homo_sapiens 0 470

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