C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MyoD family inhibitor domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120512 Mdfic-004 ENSMUSG00000041390 10090 + 6:15721087-15800808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120512
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120512 4.700±0.96 15.544±3.41 4.856±1.31 0.852±0.11 5.520±2.12 3.834±0.75 2.176±0.16 3.389±0.95 1.326±0.54 6.975±0.05 0.764±0.00 12.909±7.00 3.814±2.25 0.189±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000411 CIL_000411_0002 CGP 6:14901349-15802169
CIL_0007K6 CIL_0007K6_0003 UCNEbase 6:14952789-16992593
CIL_0008OY CIL_0008OY_0002 VISTA 6:15135024-15737812
CIL_000814 CIL_000814_0002 VISTA 6:15186410-15787741
CIL_000894 CIL_000894_0002 VISTA 6:15200356-15801750
CIL_00094G CIL_00094G_0002 VISTA 6:15310145-15910753
CIL_000410 CIL_000410_0002 CGP 6:15720661-16898441

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005730 IDA nucleolus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008134 ISS transcription factor binding
GO:0030332 ISS cyclin binding
GO:0030957 ISS Tat protein binding
GO:0042308 IDA negative regulation of protein import into nucleus
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0050434 ISS positive regulation of viral transcription

Homologs

No Homologs available.

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