C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin binding protein 6 (amisyn)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120531 Stxbp6-002 ENSMUSG00000046314 10090 - 12:44852488-45074112 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120531
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120531 0.603±0.06 4.113±0.00 2.363±0.43 1.370±0.63 2.036±0.51 0.832±0.01 1.325±0.19 3.336±0.00 0.989±0.00 4.634±2.72 0.978±0.99 0.471±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EO CIL_0005EO_0002 CGP 12:44852488-46818775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0035542 IEA regulation of SNARE complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323944 STXBP6-006 protein_coding Homo_sapiens 0 1007
ENST00000396700 STXBP6-001 protein_coding Homo_sapiens 0 1007
ENST00000419632 STXBP6-002 protein_coding Homo_sapiens 0 1007
ENST00000546511 STXBP6-003 protein_coding Homo_sapiens 0 1007
ENST00000548182 STXBP6-004 nonsense_mediated_decay Homo_sapiens 0 645
ENST00000548369 STXBP6-005 protein_coding Homo_sapiens 0 335
ENST00000550887 STXBP6-007 protein_coding Homo_sapiens 0 1007

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