C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NIMA (never in mitosis gene a)-related expressed kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120689 Nek1-002 ENSMUSG00000031644 10090 + 8:60993195-61131339 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000120689
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000120689 0.550±0.06 0.685±0.12 2.360±1.67 0.315±0.07 0.304±0.10 0.508±0.00 0.540±0.07 0.730±0.00 0.450±0.14 4.487±0.00 1.020±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KO CIL_0006KO_0002 CGP 8:60993195-61396072

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 ISA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 ISA nucleus
GO:0005737 ISA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0010212 IMP response to ionizing radiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000439128 NEK1-001 protein_coding Homo_sapiens 0 1947
ENST00000505119 NEK1-008 protein_coding Homo_sapiens 0 435
ENST00000507142 NEK1-004 protein_coding Homo_sapiens 0 2189
ENST00000509912 NEK1-007 retained_intron Homo_sapiens 0 1391
ENST00000510108 NEK1-006 nonsense_mediated_decay Homo_sapiens 0 830
ENST00000510533 NEK1-002 protein_coding Homo_sapiens 0 1947
ENST00000511633 NEK1-003 protein_coding Homo_sapiens 0 3976
ENST00000512193 NEK1-005 protein_coding Homo_sapiens 0 1947

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