C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 19, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120890 Dnajc19-ps-001 ENSMUSG00000083854 10090 - 7:103882654-103883004 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000120890
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000120890 0.192±0.00 1.094±0.65 0.255±0.00 0.401±0.00 0.257±0.08 0.358±0.11 0.382±0.24 0.099±0.00 1.039±0.83 0.130±0.10 0.297±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0002 VISTA 7:103558636-104159881
CIL_0003R7 CIL_0003R7_000A CGP 7:103881306-103893733

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382564 DNAJC19-001 protein_coding Homo_sapiens 0 496
ENST00000428811 DNAJC19P7-001 processed_pseudogene Homo_sapiens 0 274
ENST00000455312 DNAJC19P1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000469657 DNAJC19-004 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000472504 DNAJC19-005 retained_intron Homo_sapiens 1e-25 121
ENST00000473762 CEACAMP3-002 processed_transcript Homo_sapiens 0 198
ENST00000478723 DNAJC19-007 retained_intron Homo_sapiens 0 381
ENST00000479269 DNAJC19-009 protein_coding Homo_sapiens 0 492
ENST00000482363 DNAJC19-002 retained_intron Homo_sapiens 0 202
ENST00000485675 DNAJC19-003 retained_intron Homo_sapiens 1e-24 119
ENST00000486355 DNAJC19-006 protein_coding Homo_sapiens 0 219
ENST00000491873 DNAJC19-008 protein_coding Homo_sapiens 0 412
ENST00000555084 DNAJC19P9-001 processed_pseudogene Homo_sapiens 0 484
ENST00000593340 DNAJC19P2-001 processed_pseudogene Homo_sapiens 0 250

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