C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491873 DNAJC19-008 ENSG00000205981 9606 - 3:180984278-180989710 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleTestisENST00000491873
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000491873 2.500±0.00 4.167±0.00 3.541±1.19 4.266±1.44 5.482±0.00 7.560±0.00 3.459±0.00 2.301±0.00 5.044±1.23 5.679±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081N CIL_00081N_0001 VISTA 3:180418639-181020170
CIL_00081O CIL_00081O_0001 VISTA 3:180444037-181045086
CIL_0007MF CIL_0007MF_0001 UCNEbase 3:180719005-182597004
CIL_0008UV CIL_0008UV_0001 VISTA 3:180755851-181358014

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006457 NAS protein folding
GO:0006626 NAS protein targeting to mitochondrion
GO:0007601 IMP visual perception
GO:0016021 NAS integral component of membrane
GO:0044267 TAS cellular protein metabolic process
GO:0048806 IMP genitalia development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108195 Dnajc19-002 protein_coding Mus_musculus 0 468
ENSMUST00000120805 Dnajc19-004 protein_coding Mus_musculus 0 433
ENSMUST00000120890 Dnajc19-ps-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000011029 Dnajc19-001 protein_coding Mus_musculus 0 309
ENSMUST00000117223 Dnajc19-003 protein_coding Mus_musculus 0 309

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