C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carcinoembryonic antigen-related cell adhesion molecule pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473762 CEACAMP3-002 ENSG00000239736 9606 + 19:41602243-41605984 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyOvaryTestisENST00000473762
Transcript ID Adrenal Breast Heart Kidney Ovary Testis
ENST00000473762 0.051±0.00 0.007±0.00 0.015±0.00 0.031±0.00 0.007±0.00 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TR CIL_0008TR_0001 VISTA 19:41131081-41732986
CIL_0003UJ CIL_0003UJ_0008 CGP 19:41549518-41729798
CIL_0003UJ CIL_0003UJ_000D CGP 19:41576273-41729798

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120890 Dnajc19-ps-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000011029 Dnajc19-001 protein_coding Mus_musculus 8.40779e-45 185
ENSMUST00000108195 Dnajc19-002 protein_coding Mus_musculus 8.40779e-45 185
ENSMUST00000117223 Dnajc19-003 protein_coding Mus_musculus 1.99965e-42 178
ENSMUST00000120805 Dnajc19-004 protein_coding Mus_musculus 2e-32 145

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