C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho family GTPase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120997 Rnd1-002 ENSMUSG00000054855 10090 - 15:98672217-98677458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000120997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120997 0.952±0.30 0.427±0.00 0.478±0.19 1.999±0.32 2.777±0.00 0.694±0.00 0.587±0.21 0.893±0.00 2.035±2.17 6.931±0.51 0.512±0.00 0.231±0.09 0.131±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000F CIL_00000F_0002 CGP 15:98645134-98677461

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309739 RND1-001 protein_coding Homo_sapiens 0 601
ENST00000551243 RND1-003 nonsense_mediated_decay Homo_sapiens 0 398

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