C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13385
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121089 Gm13385-001 ENSMUSG00000082796 10090 - 2:28793350-28793569 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaTestisENSMUST00000121089
Transcript ID Brain Liver Ovary Placenta Testis
ENSMUST00000121089 0.316±0.07 0.269±0.00 1.025±0.00 0.090±0.00 1.308±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XE CIL_0002XE_0002 CGP 2:28692080-28813165
CIL_0007OT CIL_0007OT_0002 UCNEbase 2:28706607-28885151

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000471756 RP11-791G16.2-001 transcribed_processed_pseudogene Homo_sapiens 5e-36 156
ENST00000475592 RP11-392P7.1-001 processed_pseudogene Homo_sapiens 8.00141e-43 178
ENST00000488045 RP11-791G16.2-002 processed_transcript Homo_sapiens 7e-36 156

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