C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007OT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
BARHL1 UCNEbase 9606 9:132620132-132870600
GeneTranscriptPositionBiotype
ENSG00000125484 (GTF3C4)
general transcription factor IIIC, polypeptide 4, 90kDa
ENST00000372146 (GTF3C4-001) 132670035-132694955 protein_coding
ENST00000483873 (GTF3C4-002) 132670035-132679310 protein_coding
ENSG00000165695 (AK8)
adenylate kinase 8
ENST00000298545 (AK8-001) 132725578-132878777 protein_coding
ENST00000467161 (AK8-005) 132725583-132727598 processed_transcript
ENST00000476719 (AK8-003) 132725578-132878777 processed_transcript
ENST00000477396 (AK8-002) 132725578-132878777 processed_transcript
ENST00000482422 (AK8-004) 132861396-132863712 processed_transcript
ENSG00000224992 (RP11-295G24.5)
ENST00000451318 (RP11-295G24.5-001) 132769453-132770212 sense_intronic
ENSG00000276629 (AL160165.1)
ENST00000620273 (AL160165.1-201) 132623250-132623333 miRNA
CIL_0007OT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
BARHL1 UCNEbase 10090 2:28706607-28885151
GeneTranscriptPositionBiotype
ENSMUSG00000026806 (Ddx31)
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31
ENSMUST00000113853 (Ddx31-001) 28840459-28905571 protein_coding
ENSMUST00000147071 (Ddx31-003) 28844902-28856231 processed_transcript
ENSMUST00000147779 (Ddx31-002) 28840406-28847511 processed_transcript
ENSMUST00000152685 (Ddx31-004) 28857141-28860077 processed_transcript
ENSMUSG00000026807 (Ak8)
adenylate kinase 8
ENSMUST00000074156 (Ak8-001) 28700164-28813165 protein_coding
ENSMUST00000123794 (Ak8-002) 28700207-28734444 processed_transcript
ENSMUST00000137588 (Ak8-003) 28742250-28760136 processed_transcript
ENSMUSG00000035666 (Gtf3c4)
general transcription factor IIIC, polypeptide 4
ENSMUST00000037117 (Gtf3c4-001) 28822305-28840286 protein_coding
ENSMUST00000124390 (Gtf3c4-002) 28835304-28840352 processed_transcript
ENSMUST00000156468 (Gtf3c4-003) 28835204-28840286 processed_transcript
ENSMUST00000171404 (Gtf3c4-201) 28822299-28840360 protein_coding
ENSMUSG00000082796 (Gm13385)
predicted gene 13385
ENSMUST00000121089 (Gm13385-001) 28793350-28793569 processed_pseudogene
ENSMUSG00000083115 (Gm13386)
predicted gene 13386
ENSMUST00000117677 (Gm13386-001) 28807708-28807831 processed_pseudogene
CIL_0007OT_0003 (Click to Hide/Show)
Notice (8): Undefined index: CIL_0007OT_0003 [APP/View/Region/show.ctp, line 46]
Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Source ID Type Tax ID Position
BARHL1 UCNEbase 7955 21:15893617-15893787
GeneTranscriptPositionBiotype
CIL_0007OT_0004 (Click to Hide/Show)
Notice (8): Undefined index: CIL_0007OT_0004 [APP/View/Region/show.ctp, line 46]
Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Source ID Type Tax ID Position
BARHL1 UCNEbase 7955 5:31334650-31346149
GeneTranscriptPositionBiotype

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007OT_0001ENSG00000125484ENST00000372146ENST00000483873ENSG00000165695ENST00000298545ENST00000467161ENST00000476719ENST00000477396ENST00000482422ENSG00000224992ENST00000451318ENSG00000276629ENST00000620273CIL_0007OT_0002ENSMUSG00000026806ENSMUST00000113853ENSMUST00000147071ENSMUST00000147779ENSMUST00000152685ENSMUSG00000026807ENSMUST00000074156ENSMUST00000123794ENSMUST00000137588ENSMUSG00000035666ENSMUST00000037117ENSMUST00000124390ENSMUST00000156468ENSMUST00000171404ENSMUSG00000082796ENSMUST00000121089ENSMUSG00000083115ENSMUST00000117677
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007OT_0001ENSG00000125484ENST00000372146ENSG00000165695ENST00000298545ENST00000476719ENST00000477396ENSG00000224992ENST00000451318ENSG00000276629ENST00000620273CIL_0007OT_0002ENSMUSG00000026806ENSMUST00000113853ENSMUST00000147779ENSMUSG00000026807ENSMUST00000074156ENSMUST00000123794ENSMUST00000137588ENSMUSG00000035666ENSMUST00000037117ENSMUST00000124390ENSMUST00000171404ENSMUSG00000082796ENSMUST00000121089ENSMUSG00000083115ENSMUST00000117677
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125484 ENST00000372146 1.915±0.00 1.962±0.00 1.154±0.00 2.590±0.36 1.964±0.05 1.781±0.10 1.806±0.77 1.951±0.44 1.558±0.76 1.494±0.87 1.265±0.78 2.707±0.91 2.502±0.25 5.277±0.12
ENST00000483873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165695 ENST00000298545 N/A N/A N/A 1.981±0.00 N/A N/A N/A 1.346±0.00 N/A 0.121±0.00 N/A 1.727±1.59 N/A 11.144±1.31
ENST00000467161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476719 0.400±0.00 N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477396 N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000482422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224992 ENST00000451318 0.044±0.00 N/A N/A 0.054±0.00 0.145±0.00 0.217±0.00 0.126±0.00 0.280±0.00 0.278±0.00 0.323±0.00 N/A 0.314±0.00 0.250±0.00 0.206±0.12
ENSG00000276629 ENST00000620273 N/A 0.406±0.00 N/A 0.887±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026806 ENSMUST00000113853 2.158±0.95 1.313±0.34 2.032±0.80 2.762±1.48 1.944±0.64 1.061±0.23 0.712±0.12 1.241±0.20 1.916±0.88 1.933±0.24 1.374±0.23 2.736±0.69 3.459±1.51 2.246±0.60
ENSMUST00000147071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147779 N/A 3.412±0.58 N/A 0.984±0.00 2.024±0.14 0.802±0.34 N/A N/A N/A N/A N/A 2.002±0.78 N/A N/A
ENSMUST00000152685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026807 ENSMUST00000074156 0.269±0.12 0.270±0.07 0.325±0.00 0.639±0.29 0.518±0.23 0.126±0.04 0.170±0.13 0.185±0.09 0.104±0.07 2.387±0.31 0.060±0.02 2.369±0.65 0.638±0.66 129.029±36.04
ENSMUST00000123794 N/A N/A N/A N/A 0.407±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.177±0.00 N/A 0.822±0.00 N/A
ENSMUSG00000035666 ENSMUST00000037117 4.832±2.29 3.964±0.91 2.970±0.03 6.131±2.56 4.583±0.44 3.313±0.51 2.624±0.34 3.265±0.32 2.933±0.66 4.099±0.18 2.530±0.24 7.395±0.76 4.325±1.51 5.237±1.38
ENSMUST00000124390 N/A 3.821±1.26 N/A N/A N/A 2.162±0.05 N/A N/A N/A N/A N/A 4.390±0.48 N/A N/A
ENSMUST00000156468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171404 N/A 1.335±0.67 0.396±0.00 1.278±0.56 0.492±0.00 0.676±0.00 0.552±0.00 0.878±0.00 0.832±0.18 0.584±0.01 N/A 1.308±0.00 N/A 0.431±0.00
ENSMUSG00000082796 ENSMUST00000121089 N/A N/A N/A 0.316±0.07 N/A N/A N/A N/A 0.269±0.00 N/A N/A 1.025±0.00 0.090±0.00 1.308±0.37
ENSMUSG00000083115 ENSMUST00000117677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.146±0.00 30.451±0.00 6.284±0.00

Loading