C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475592 RP11-392P7.1-001 ENSG00000241352 9606 + 12:12850982-12851740 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000475592
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000475592 0.120±0.00 0.216±0.00 0.127±0.00 0.107±0.00 0.066±0.00 0.046±0.03 0.054±0.00 0.032±0.00 0.017±0.00 0.096±0.00 0.179±0.14 0.041±0.01 0.136±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003H4 CIL_0003H4_0001 CGP 12:12813316-12917937

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118499 Rps6-ps4-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000074205 Rps6-ps1-201 processed_pseudogene Mus_musculus 0 691
ENSMUST00000102814 Rps6-001 protein_coding Mus_musculus 0 691
ENSMUST00000100510 Gm16409-201 processed_pseudogene Mus_musculus 0 675
ENSMUST00000121853 Gm11263-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000118010 Rps6-ps3-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000079841 Rps6-ps2-201 processed_pseudogene Mus_musculus 0 625
ENSMUST00000122061 Gm14138-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000121487 Gm11604-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000118824 Gm12242-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000136174 Rps6-002 processed_transcript Mus_musculus 0 571
ENSMUST00000118220 Gm8145-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000123229 Rps6-004 processed_transcript Mus_musculus 0 438
ENSMUST00000121089 Gm13385-001 processed_pseudogene Mus_musculus 8.00141e-43 178
ENSMUST00000130001 Rps6-003 processed_transcript Mus_musculus 5e-35 152

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