C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 4852
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121202 Gm4852-001 ENSMUSG00000081185 10090 - 1:47365644-47366372 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000121202
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000121202 0.030±0.02 0.015±0.00 0.032±0.02 0.094±0.00 0.087±0.07 0.209±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262177 DNAJB6-001 protein_coding Homo_sapiens 0 911
ENST00000405542 RP3-508D13.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000412557 DNAJB6-011 protein_coding Homo_sapiens 0 494
ENST00000413963 RP11-300I6.5-001 processed_pseudogene Homo_sapiens 0 688
ENST00000417758 DNAJB6-009 protein_coding Homo_sapiens 0 896
ENST00000429029 DNAJB6-002 protein_coding Homo_sapiens 0 955
ENST00000432257 RP4-763G1.1-001 processed_pseudogene Homo_sapiens 0 702
ENST00000441291 DNAJB6-015 nonsense_mediated_decay Homo_sapiens 0 464
ENST00000441561 DNAJB6-008 protein_coding Homo_sapiens 0 555
ENST00000443280 DNAJB6-007 protein_coding Homo_sapiens 0 464
ENST00000452903 AC009502.1-001 processed_pseudogene Homo_sapiens 0 429
ENST00000453383 DNAJB6-012 protein_coding Homo_sapiens 0 375
ENST00000459889 DNAJB6-004 retained_intron Homo_sapiens 0 911
ENST00000465908 DNAJB6-017 processed_transcript Homo_sapiens 0 451
ENST00000485817 RP11-775J23.2-001 processed_pseudogene Homo_sapiens 0 562
ENST00000486083 DNAJB6-020 processed_transcript Homo_sapiens 0 464
ENST00000487480 DNAJB6-005 retained_intron Homo_sapiens 0 497
ENST00000488001 DNAJB6-014 processed_transcript Homo_sapiens 0 464
ENST00000515686 RP11-14I17.1-001 processed_pseudogene Homo_sapiens 0 555
ENST00000526843 RP11-676M6.1-001 processed_pseudogene Homo_sapiens 0 920

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