C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526843 RP11-676M6.1-001 ENSG00000254612 9606 - 11:127940913-127941654 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyMuscleOvaryPlacentaTestisENST00000526843
Transcript ID Adipose Brain Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000526843 0.052±0.00 0.055±0.00 0.048±0.00 0.016±0.00 0.036±0.00 0.032±0.00 0.170±0.00 0.050±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050Y CIL_00050Y_0002 CGP 11:126423359-128587558

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114839 Dnajb6-002 protein_coding Mus_musculus 0 957
ENSMUST00000167639 Gm6395-201 pseudogene Mus_musculus 0 941
ENSMUST00000117516 Gm13414-001 processed_pseudogene Mus_musculus 0 928
ENSMUST00000121202 Gm4852-001 processed_pseudogene Mus_musculus 0 920
ENSMUST00000008733 Dnajb6-001 protein_coding Mus_musculus 0 893
ENSMUST00000119145 Gm15785-001 processed_pseudogene Mus_musculus 0 750
ENSMUST00000012734 Dnajb6-003 protein_coding Mus_musculus 0 473
ENSMUST00000161209 Gm2541-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000140376 Dnajb6-009 protein_coding Mus_musculus 0 355
ENSMUST00000139126 Dnajb6-008 retained_intron Mus_musculus 0 355
ENSMUST00000151976 Dnajb6-005 retained_intron Mus_musculus 0 207

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