C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413963 RP11-300I6.5-001 ENSG00000256441 9606 - 11:69737298-69738017 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastTestisENST00000413963
Transcript ID Breast Testis
ENST00000413963 0.018±0.00 0.085±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TF CIL_0007TF_0001 VISTA 11:69193417-69797766

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117516 Gm13414-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000114839 Dnajb6-002 protein_coding Mus_musculus 0 706
ENSMUST00000167639 Gm6395-201 pseudogene Mus_musculus 0 689
ENSMUST00000121202 Gm4852-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000008733 Dnajb6-001 protein_coding Mus_musculus 0 680
ENSMUST00000119145 Gm15785-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000012734 Dnajb6-003 protein_coding Mus_musculus 0 361
ENSMUST00000161209 Gm2541-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000140376 Dnajb6-009 protein_coding Mus_musculus 0 279
ENSMUST00000139126 Dnajb6-008 retained_intron Mus_musculus 0 243

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