C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11677
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121349 Gm11677-001 ENSMUSG00000081666 10090 - 11:111724648-111725624 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000121349
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000121349 0.091±0.01 0.130±0.00 0.085±0.02 0.084±0.00 0.075±0.00 0.036±0.00 0.052±0.03 0.027±0.00 0.053±0.00 0.079±0.05 0.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072G CIL_00072G_0002 CGP 11:111066164-112787760
CIL_00088A CIL_00088A_0002 VISTA 11:111263100-111864002
CIL_0008WI CIL_0008WI_0002 VISTA 11:111268522-111869439
CIL_0008WH CIL_0008WH_0002 VISTA 11:111327111-111928109
CIL_000970 CIL_000970_0002 VISTA 11:111347327-111948996
CIL_000971 CIL_000971_0002 VISTA 11:111366051-111967477
CIL_000972 CIL_000972_0002 VISTA 11:111481021-112081954
CIL_0007VG CIL_0007VG_0002 VISTA 11:111527905-112129224
CIL_000973 CIL_000973_0002 VISTA 11:111661102-112262964

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291182 ZNF235-001 protein_coding Homo_sapiens 0 739
ENST00000587921 ZNF235-002 retained_intron Homo_sapiens 0 739
ENST00000613197 ZNF229-001 protein_coding Homo_sapiens 0.00000004 66
ENST00000614049 ZNF229-002 protein_coding Homo_sapiens 0.00000004 66
ENST00000616224 ZNF235-201 protein_coding Homo_sapiens 0 580
ENST00000620012 ZNF229-003 nonsense_mediated_decay Homo_sapiens 0.00000005 66

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