C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00072G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123700-ENSG00000125398 CGP 9606 17:70168673-72126420
GeneTranscriptPositionBiotype
ENSG00000123700 (KCNJ2)
potassium inwardly-rectifying channel, subfamily J, member 2 		ENST00000243457 (KCNJ2-002) 70169535-70180048 protein_coding
ENST00000535240 (KCNJ2-001) 70168673-70176323 protein_coding
ENSG00000125398 (SOX9)
SRY (sex determining region Y)-box 9 		ENST00000245479 (SOX9-001) 72121020-72126420 protein_coding
ENSG00000225818 (AC118653.2)
 ENST00000442627 (AC118653.2-001) 71596338-71597278 lincRNA
ENST00000450826 (AC118653.2-002) 71596476-71597279 lincRNA
ENSG00000226101 (AC007461.2)
 ENST00000419257 (AC007461.2-001) 72072333-72093481 lincRNA
ENSG00000228118 (LOC124685)
 ENST00000412707 (LOC124685-001) 71620978-71621436 processed_pseudogene
ENSG00000228639 (AC005152.3)
 ENST00000430908 (AC005152.3-001) 72021851-72025962 lincRNA
ENST00000543512 (AC005152.3-002) 72021851-72034092 lincRNA
ENSG00000256124 (LINC01152)
long intergenic non-protein coding RNA 1152 		ENST00000472655 (LINC01152-003) 72030654-72041297 lincRNA
ENST00000538693 (LINC01152-001) 72030291-72036316 lincRNA
ENST00000538810 (LINC01152-002) 72030654-72038748 lincRNA
ENSG00000260785 (CASC17)
cancer susceptibility candidate 17 (non-protein coding) 		ENST00000569074 (CASC17-001) 71097775-71202177 lincRNA
ENSG00000267109 (CTD-2378E21.1)
 ENST00000592809 (CTD-2378E21.1-001) 70312831-70368916 lincRNA
ENSG00000267170 (CALM2P1)
calmodulin 2 pseudogene 1 		ENST00000585658 (CALM2P1-001) 70241324-70241761 processed_pseudogene
ENSG00000267365 (KCNJ2-AS1)
KCNJ2 antisense RNA 1 (head to head) 		ENST00000590966 (KCNJ2-AS1-001) 70166961-70169402 antisense
ENSG00000271101 (RP11-1003J3.1)
 ENST00000604782 (RP11-1003J3.1-001) 71011997-71013587 processed_pseudogene
ENSG00000271239 (RP11-238F2.1)
 ENST00000605009 (RP11-238F2.1-001) 70778604-70779230 lincRNA
CIL_00072G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041695-ENSMUSG00000000567 CGP 10090 11:111066164-112787760
GeneTranscriptPositionBiotype
ENSMUSG00000000567 (Sox9)
SRY (sex determining region Y)-box 9 		ENSMUST00000000579 (Sox9-001) 112782224-112787760 protein_coding
ENSMUSG00000041674 (BC006965)
cDNA sequence BC006965 		ENSMUST00000124028 (BC006965-001) 112663927-112711356 processed_transcript
ENSMUST00000125873 (BC006965-011) 112677290-112691359 processed_transcript
ENSMUST00000131057 (BC006965-002) 112687643-112711341 processed_transcript
ENSMUST00000133231 (BC006965-014) 112669201-112677220 processed_transcript
ENSMUST00000137081 (BC006965-004) 112687645-112781976 processed_transcript
ENSMUST00000139027 (BC006965-005) 112691324-112711339 processed_transcript
ENSMUST00000141399 (BC006965-017) 112664839-112669398 processed_transcript
ENSMUST00000142282 (BC006965-016) 112670187-112672210 processed_transcript
ENSMUST00000142413 (BC006965-008) 112684575-112711363 processed_transcript
ENSMUST00000143060 (BC006965-007) 112684682-112711356 processed_transcript
ENSMUST00000143550 (BC006965-015) 112664815-112672210 processed_transcript
ENSMUST00000143760 (BC006965-009) 112672174-112711340 processed_transcript
ENSMUST00000144036 (BC006965-006) 112684464-112691518 processed_transcript
ENSMUST00000148724 (BC006965-018) 112718876-112744277 processed_transcript
ENSMUST00000151650 (BC006965-013) 112677406-112711362 processed_transcript
ENSMUST00000154379 (BC006965-012) 112672087-112710922 processed_transcript
ENSMUST00000155766 (BC006965-003) 112687643-112711341 processed_transcript
ENSMUST00000156388 (BC006965-010) 112677481-112711340 processed_transcript
ENSMUSG00000041695 (Kcnj2)
potassium inwardly-rectifying channel, subfamily J, member 2 		ENSMUST00000042970 (Kcnj2-001) 111066164-111076821 protein_coding
ENSMUSG00000081666 (Gm11677)
predicted gene 11677 		ENSMUST00000121349 (Gm11677-001) 111724648-111725624 processed_pseudogene
ENSMUSG00000082272 (Gm11675)
predicted gene 11675 		ENSMUST00000121873 (Gm11675-001) 111276100-111276931 processed_pseudogene
ENSMUSG00000082448 (Gm11676)
predicted gene 11676 		ENSMUST00000120443 (Gm11676-001) 111612817-111613306 processed_pseudogene
ENSMUSG00000086752 (Gm11674)
predicted gene 11674 		ENSMUST00000124855 (Gm11674-001) 111796347-111800876 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072G_0001ENSG00000123700ENST00000243457ENST00000535240ENSG00000125398ENST00000245479ENSG00000225818ENST00000442627ENST00000450826ENSG00000226101ENST00000419257ENSG00000228118ENST00000412707ENSG00000228639ENST00000430908ENST00000543512ENSG00000256124ENST00000472655ENST00000538693ENST00000538810ENSG00000260785ENST00000569074ENSG00000267109ENST00000592809ENSG00000267170ENST00000585658ENSG00000267365ENST00000590966ENSG00000271101ENST00000604782ENSG00000271239ENST00000605009CIL_00072G_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072G_0001ENSG00000123700ENST00000243457ENST00000535240ENSG00000125398ENST00000245479ENSG00000225818ENST00000442627ENST00000450826ENSG00000226101ENST00000419257ENSG00000228118ENST00000412707ENSG00000228639ENST00000430908ENST00000543512ENSG00000256124ENST00000472655ENSG00000260785ENST00000569074ENSG00000267109ENST00000592809ENSG00000267170ENST00000585658ENSG00000267365ENST00000590966ENSG00000271101ENST00000604782ENSG00000271239ENST00000605009CIL_00072G_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123700 ENST00000243457 0.741±0.00 N/A 0.282±0.00 1.562±0.80 1.094±0.02 1.614±0.00 5.177±1.70 0.293±0.00 0.456±0.00 1.126±0.44 1.663±0.88 0.409±0.04 1.621±0.92 0.138±0.00
ENST00000535240 N/A N/A N/A N/A 0.795±0.00 0.985±0.00 N/A N/A N/A N/A 0.616±0.00 0.281±0.00 N/A N/A
ENSG00000125398 ENST00000245479 2.133±0.00 1.908±0.00 1.340±0.00 17.647±13.55 7.871±4.24 3.370±0.14 4.012±3.28 6.601±6.44 0.574±0.18 1.162±0.71 0.518±0.06 18.778±19.47 0.591±0.19 19.433±0.10
ENSG00000225818 ENST00000442627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.386±0.12
ENST00000450826 N/A N/A N/A 1.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.226±0.00
ENSG00000226101 ENST00000419257 N/A N/A N/A N/A N/A 0.105±0.00 N/A 0.206±0.00 N/A 0.035±0.00 N/A N/A N/A 0.336±0.05
ENSG00000228118 ENST00000412707 0.126±0.00 0.034±0.00 N/A 0.105±0.00 N/A 0.096±0.00 N/A 0.172±0.00 0.032±0.00 0.071±0.00 N/A N/A N/A 0.147±0.07
ENSG00000228639 ENST00000430908 N/A N/A N/A N/A 1.375±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.270±0.00
ENST00000543512 N/A N/A N/A N/A 1.022±0.00 N/A N/A 1.889±0.00 0.264±0.00 N/A N/A N/A N/A 0.074±0.00
ENSG00000256124 ENST00000472655 0.012±0.00 0.115±0.00 0.107±0.00 0.330±0.23 0.397±0.23 0.074±0.00 N/A 0.071±0.00 0.032±0.00 0.013±0.00 N/A 0.044±0.02 0.009±0.00 0.470±0.06
ENST00000538693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260785 ENST00000569074 N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A 0.630±0.30
ENSG00000267109 ENST00000592809 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A
ENSG00000267170 ENST00000585658 N/A 0.080±0.00 N/A 0.076±0.00 0.052±0.00 0.024±0.00 N/A N/A N/A 0.198±0.00 N/A N/A 0.159±0.00 0.047±0.00
ENSG00000267365 ENST00000590966 1.006±0.00 N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A 0.159±0.00 0.623±0.00 0.099±0.00
ENSG00000271101 ENST00000604782 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A 0.033±0.00
ENSG00000271239 ENST00000605009 1.272±0.00 0.050±0.00 N/A 0.309±0.00 2.980±0.00 0.165±0.00 N/A 2.827±0.00 0.717±0.00 0.154±0.00 0.117±0.00 N/A N/A 0.163±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000567 ENSMUST00000000579 1.629±1.06 1.371±0.29 0.496±0.01 7.823±3.74 8.952±3.96 33.712±2.54 1.010±0.35 0.386±0.06 0.848±0.43 0.570±0.11 0.389±0.13 5.315±2.41 0.670±0.21 2.864±1.29
ENSMUSG00000041674 ENSMUST00000124028 0.036±0.01 N/A 0.015±0.00 N/A 1.139±0.29 0.082±0.03 0.016±0.00 0.023±0.01 0.024±0.01 0.033±0.00 0.027±0.01 0.058±0.03 0.007±0.00 0.043±0.00
ENSMUST00000125873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 0.112±0.00 N/A 0.066±0.01
ENSMUST00000131057 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.01 N/A 0.046±0.00 N/A N/A 0.069±0.00
ENSMUST00000133231 N/A N/A 0.031±0.00 N/A N/A 0.229±0.00 N/A N/A N/A 0.063±0.00 0.054±0.02 N/A 0.052±0.00 0.111±0.00
ENSMUST00000137081 0.079±0.00 N/A 0.018±0.00 N/A N/A 0.150±0.00 0.042±0.02 N/A 0.078±0.03 N/A 0.083±0.06 N/A 0.011±0.00 0.141±0.05
ENSMUST00000139027 N/A N/A N/A N/A 1.630±0.00 0.270±0.15 N/A N/A 0.036±0.00 N/A 0.050±0.00 0.615±0.00 0.085±0.00 0.212±0.13
ENSMUST00000141399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 0.661±0.00 0.159±0.13 1.299±0.00
ENSMUST00000142282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143060 N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143760 N/A N/A N/A 0.203±0.00 N/A 0.212±0.10 N/A 0.062±0.02 0.035±0.00 N/A 0.100±0.05 0.054±0.00 N/A 0.194±0.12
ENSMUST00000144036 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A 0.072±0.00 N/A
ENSMUST00000148724 N/A N/A N/A N/A N/A N/A 0.077±0.00 0.226±0.00 N/A N/A N/A 0.345±0.25 N/A N/A
ENSMUST00000151650 N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A 0.091±0.00 0.185±0.00
ENSMUST00000155766 N/A N/A 0.027±0.00 N/A N/A N/A N/A 0.034±0.00 0.011±0.00 N/A 0.034±0.00 0.032±0.00 N/A N/A
ENSMUST00000156388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A
ENSMUSG00000041695 ENSMUST00000042970 1.374±0.30 1.254±0.37 0.938±0.05 0.981±0.08 3.194±2.19 0.432±0.17 7.596±1.11 0.677±0.10 0.268±0.23 3.853±0.23 10.246±2.18 1.317±0.53 0.241±0.20 0.090±0.06
ENSMUSG00000081666 ENSMUST00000121349 N/A 0.091±0.01 0.130±0.00 0.085±0.02 N/A 0.084±0.00 0.075±0.00 0.036±0.00 0.052±0.03 N/A 0.027±0.00 0.053±0.00 0.079±0.05 0.074±0.00
ENSMUSG00000082272 ENSMUST00000121873 N/A N/A 0.057±0.00 0.016±0.00 N/A N/A N/A N/A 0.031±0.01 N/A N/A 0.050±0.00 0.068±0.00 0.066±0.02
ENSMUSG00000082448 ENSMUST00000120443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.00
ENSMUSG00000086752 ENSMUST00000124855 N/A N/A N/A N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A N/A N/A

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