C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00088A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm627 VISTA 9606 17:70361708-70962612
GeneTranscriptPositionBiotype
ENSG00000267109 (CTD-2378E21.1)
 ENST00000592809 (CTD-2378E21.1-001) 70312831-70368916 lincRNA
ENSG00000271239 (RP11-238F2.1)
 ENST00000605009 (RP11-238F2.1-001) 70778604-70779230 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00088A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm627 VISTA 10090 11:111263100-111864002
GeneTranscriptPositionBiotype
ENSMUSG00000081666 (Gm11677)
predicted gene 11677 		ENSMUST00000121349 (Gm11677-001) 111724648-111725624 processed_pseudogene
ENSMUSG00000082272 (Gm11675)
predicted gene 11675 		ENSMUST00000121873 (Gm11675-001) 111276100-111276931 processed_pseudogene
ENSMUSG00000082448 (Gm11676)
predicted gene 11676 		ENSMUST00000120443 (Gm11676-001) 111612817-111613306 processed_pseudogene
ENSMUSG00000086752 (Gm11674)
predicted gene 11674 		ENSMUST00000124855 (Gm11674-001) 111796347-111800876 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088A_0001ENSG00000267109ENST00000592809ENSG00000271239ENST00000605009CIL_00088A_0002ENSMUSG00000081666ENSMUST00000121349ENSMUSG00000082272ENSMUST00000121873ENSMUSG00000082448ENSMUST00000120443ENSMUSG00000086752ENSMUST00000124855
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088A_0001ENSG00000267109ENST00000592809ENSG00000271239ENST00000605009CIL_00088A_0002ENSMUSG00000081666ENSMUST00000121349ENSMUSG00000082272ENSMUST00000121873ENSMUSG00000082448ENSMUST00000120443ENSMUSG00000086752ENSMUST00000124855
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000267109 ENST00000592809 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A
ENSG00000271239 ENST00000605009 1.272±0.00 0.050±0.00 N/A 0.309±0.00 2.980±0.00 0.165±0.00 N/A 2.827±0.00 0.717±0.00 0.154±0.00 0.117±0.00 N/A N/A 0.163±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000081666 ENSMUST00000121349 N/A 0.091±0.01 0.130±0.00 0.085±0.02 N/A 0.084±0.00 0.075±0.00 0.036±0.00 0.052±0.03 N/A 0.027±0.00 0.053±0.00 0.079±0.05 0.074±0.00
ENSMUSG00000082272 ENSMUST00000121873 N/A N/A 0.057±0.00 0.016±0.00 N/A N/A N/A N/A 0.031±0.01 N/A N/A 0.050±0.00 0.068±0.00 0.066±0.02
ENSMUSG00000082448 ENSMUST00000120443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.00
ENSMUSG00000086752 ENSMUST00000124855 N/A N/A N/A N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A N/A N/A

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