Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	predicted gene 12346
ENSMUST00000121455	Gm12346-001	ENSMUSG00000083899	10090	+	11:77293444-77295898	transcribed_processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000121455	0.154±0.08	1.831±1.57	5.831±3.48	0.205±0.07	0.150±0.07	0.109±0.07	0.117±0.03	2.443±4.23	0.244±0.06	0.053±0.02	0.212±0.15	0.239±0.27	1.113±0.44

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_000873	CIL_000873_0002	VISTA	11:77122469-77724441
CIL_0009BZ	CIL_0009BZ_0002	VISTA	11:77122483-77724456

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000216281	HSP90AA1-002	protein_coding	Homo_sapiens	0	2856
ENST00000334701	HSP90AA1-001	protein_coding	Homo_sapiens	0	2848
ENST00000378770	HSP90AA4P-002	processed_transcript	Homo_sapiens	0	518
ENST00000436135	RP11-144L1.8-001	processed_pseudogene	Homo_sapiens	0	2135
ENST00000438353	HSP90AA5P-001	transcribed_processed_pseudogene	Homo_sapiens	0	1956
ENST00000506634	HSP90AA6P-001	transcribed_processed_pseudogene	Homo_sapiens	0	822
ENST00000506915	HSP90AA4P-001	transcribed_processed_pseudogene	Homo_sapiens	0	2206
ENST00000530115	RP11-1033A18.1-001	processed_pseudogene	Homo_sapiens	0	2693
ENST00000553585	HSP90AA1-005	protein_coding	Homo_sapiens	0	374
ENST00000554401	HSP90AA1-003	nonsense_mediated_decay	Homo_sapiens	0	1546
ENST00000556554	HSP90AA1-004	retained_intron	Homo_sapiens	0	246
ENST00000557234	HSP90AA1-008	nonsense_mediated_decay	Homo_sapiens	0	411
ENST00000560130	HSP90AA1-009	retained_intron	Homo_sapiens	0	335

Loading