C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 90kDa alpha (cytosolic), class A member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216281 HSP90AA1-002 ENSG00000080824 9606 - 14:102080738-102087191 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216281 24.463±0.00 49.180±0.00 20.389±0.00 58.978±6.54 91.112±18.94 74.420±20.26 27.539±10.55 71.310±15.36 37.946±8.95 79.869±2.16 22.072±8.35 101.449±58.47 78.322±3.91 122.602±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001G1 CIL_0001G1_0001 CGP 14:102080738-102224847

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000166 TAS nucleotide binding
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005524 TAS:IEA ATP binding
GO:0005576 TAS extracellular region
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 NAS cytosol
GO:0005886 TAS plasma membrane
GO:0006200 IDA ATP catabolic process
GO:0006457 IEA protein folding
GO:0006839 TAS mitochondrial transport
GO:0006950 IEA response to stress
GO:0006986 NAS response to unfolded protein
GO:0007165 NAS signal transduction
GO:0007411 TAS axon guidance
GO:0016020 IDA membrane
GO:0016887 IDA ATPase activity
GO:0023026 IDA MHC class II protein complex binding
GO:0030235 IDA nitric-oxide synthase regulator activity
GO:0030911 TAS TPR domain binding
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042026 TAS protein refolding
GO:0042802 IPI identical protein binding
GO:0042803 TAS protein homodimerization activity
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045040 IDA protein import into mitochondrial outer membrane
GO:0045087 TAS innate immune response
GO:0045429 ISS positive regulation of nitric oxide biosynthetic process
GO:0046209 TAS nitric oxide metabolic process
GO:0050999 TAS regulation of nitric-oxide synthase activity
GO:0051082 IEA unfolded protein binding
GO:0051131 IDA chaperone-mediated protein complex assembly
GO:0070062 IDA extracellular vesicular exosome
GO:0071682 TAS endocytic vesicle lumen

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094361 Hsp90aa1-001 protein_coding Mus_musculus 0 3035
ENSMUST00000021698 Hsp90aa1-002 protein_coding Mus_musculus 0 2916
ENSMUST00000121455 Gm12346-001 transcribed_processed_pseudogene Mus_musculus 0 2856
ENSMUST00000119417 Gm5844-001 processed_pseudogene Mus_musculus 0 2769
ENSMUST00000189380 RP23-32C18.4-001 processed_pseudogene Mus_musculus 0 1013
ENSMUST00000145255 Hsp90aa1-004 retained_intron Mus_musculus 0 785
ENSMUST00000155242 Hsp90aa1-006 protein_coding Mus_musculus 0 739
ENSMUST00000134967 Hsp90aa1-007 retained_intron Mus_musculus 0 525
ENSMUST00000121624 Gm11910-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000124156 Hsp90aa1-005 protein_coding Mus_musculus 0 357
ENSMUST00000149189 Hsp90aa1-003 protein_coding Mus_musculus 0 331
ENSMUST00000120727 Gm15937-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000133966 Ptger4-003 processed_transcript Mus_musculus 0 193

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