C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 90kDa alpha (cytosolic), class A member 2, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530115 RP11-1033A18.1-001 ENSG00000224411 9606 - 11:27888838-27891033 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000530115
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000530115 0.080±0.00 0.059±0.00 0.112±0.10 0.093±0.00 0.111±0.09 0.033±0.02 0.113±0.10 0.033±0.00 0.052±0.00 0.046±0.00 0.048±0.03 0.052±0.04 0.210±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RP CIL_0004RP_0002 CGP 11:27654893-28108308

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021698 Hsp90aa1-002 protein_coding Mus_musculus 0 2719
ENSMUST00000094361 Hsp90aa1-001 protein_coding Mus_musculus 0 2719
ENSMUST00000121455 Gm12346-001 transcribed_processed_pseudogene Mus_musculus 0 2693
ENSMUST00000119417 Gm5844-001 processed_pseudogene Mus_musculus 0 2632
ENSMUST00000189380 RP23-32C18.4-001 processed_pseudogene Mus_musculus 0 944
ENSMUST00000145255 Hsp90aa1-004 retained_intron Mus_musculus 0 741
ENSMUST00000155242 Hsp90aa1-006 protein_coding Mus_musculus 0 721
ENSMUST00000134967 Hsp90aa1-007 retained_intron Mus_musculus 0 484
ENSMUST00000121624 Gm11910-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000124156 Hsp90aa1-005 protein_coding Mus_musculus 0 342
ENSMUST00000149189 Hsp90aa1-003 protein_coding Mus_musculus 0 318
ENSMUST00000120727 Gm15937-001 processed_pseudogene Mus_musculus 1.4013e-45 189
ENSMUST00000133966 Ptger4-003 processed_transcript Mus_musculus 4.00001e-40 171

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