C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-stimulated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121645 Isg20-002 ENSMUSG00000039236 10090 + 7:78913458-78920307 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleTestisENSMUST00000121645
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENSMUST00000121645 0.525±0.00 0.351±0.00 1.858±0.42 3.205±0.00 0.628±0.00 0.863±0.00 0.427±0.22 2.402±0.00 0.214±0.06 57.012±2.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011F CIL_00011F_0002 CGP 7:78895854-78920362
CIL_00011K CIL_00011K_0002 CGP 7:78913424-79115099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000175 IEA 3'-5'-exoribonuclease activity
GO:0000738 IEA DNA catabolic process, exonucleolytic
GO:0004527 ISS exonuclease activity
GO:0005634 ISS nucleus
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0006364 IEA rRNA processing
GO:0006401 IEA RNA catabolic process
GO:0008310 IEA single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008859 IEA exoribonuclease II activity
GO:0009615 IEA response to virus
GO:0015030 ISS Cajal body
GO:0016605 IEA PML body
GO:0030619 ISS U1 snRNA binding
GO:0030620 ISS U2 snRNA binding
GO:0034511 ISS U3 snoRNA binding
GO:0045071 IEA negative regulation of viral genome replication
GO:0045087 IEA innate immune response
GO:0046872 IEA metal ion binding
GO:0051607 ISS defense response to virus
GO:0090503 IEA RNA phosphodiester bond hydrolysis, exonucleolytic

Homologs

No Homologs available.

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