C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamatic-oxaloacetic transaminase 2, mitochondrial, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121655 Got2-ps1-001 ENSMUSG00000080935 10090 - 5:138364260-138365552 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121655
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121655 3.107±1.06 0.944±0.25 2.275±0.00 2.471±0.38 1.530±0.94 0.888±0.41 12.640±3.27 3.893±1.80 4.964±1.70 1.195±0.27 0.972±0.32 2.888±2.35 2.117±2.34 0.835±0.46

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245206 GOT2-001 protein_coding Homo_sapiens 0 1574
ENST00000426641 GOT2P3-001 transcribed_processed_pseudogene Homo_sapiens 0 1179
ENST00000434819 GOT2-005 protein_coding Homo_sapiens 0 1110
ENST00000450663 GOT2P2-001 processed_pseudogene Homo_sapiens 0 1116
ENST00000492378 GOT2-002 retained_intron Homo_sapiens 0 466
ENST00000496461 GOT2-003 retained_intron Homo_sapiens 0 743
ENST00000540992 RP11-424M22.1-001 processed_pseudogene Homo_sapiens 0 769
ENST00000564400 GOT2-009 processed_transcript Homo_sapiens 0 848
ENST00000568368 GOT2-010 nonsense_mediated_decay Homo_sapiens 1.4013e-45 187

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