C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamic-oxaloacetic transaminase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000245206 GOT2-001 ENSG00000125166 9606 - 16:58707131-58734357 protein_coding

Homo sapiens EnsemblGRCh38

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Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000245206
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000245206 17.748±0.00 25.861±0.00 4.755±0.00 28.383±6.16 8.643±6.00 16.157±7.26 55.980±39.94 22.425±5.44 42.870±37.50 6.700±4.39 52.461±25.67 22.314±11.35 18.174±4.70 23.722±6.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J0 CIL_0004J0_0001 CGP 16:58665109-58734357

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004069 ISS L-aspartate:2-oxoglutarate aminotransferase activity
GO:0005739 ISS mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005759 TAS mitochondrial matrix
GO:0005886 IDA plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006006 TAS glucose metabolic process
GO:0006094 TAS gluconeogenesis
GO:0006103 ISS 2-oxoglutarate metabolic process
GO:0006107 IEA oxaloacetate metabolic process
GO:0006531 ISS aspartate metabolic process
GO:0006532 IEA aspartate biosynthetic process
GO:0006533 IDA aspartate catabolic process
GO:0006536 ISS glutamate metabolic process
GO:0008652 TAS cellular amino acid biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0015908 IEP fatty acid transport
GO:0016212 IEA kynurenine-oxoglutarate transaminase activity
GO:0019470 TAS 4-hydroxyproline catabolic process
GO:0019550 IEA glutamate catabolic process to aspartate
GO:0019551 IEA glutamate catabolic process to 2-oxoglutarate
GO:0030170 IEA pyridoxal phosphate binding
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045471 IDA response to ethanol
GO:0070062 IDA extracellular vesicular exosome
GO:0080130 IEA L-phenylalanine:2-oxoglutarate aminotransferase activity
GO:0097052 IEA L-kynurenine metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034097 Got2-001 protein_coding Mus_musculus 0 1639
ENSMUST00000121655 Got2-ps1-001 processed_pseudogene Mus_musculus 0 1574
ENSMUST00000100526 Gm10874-201 protein_coding Mus_musculus 0 1387
ENSMUST00000147040 Got2-002 processed_transcript Mus_musculus 0 869

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