C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14162
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121985 Gm14162-001 ENSMUSG00000082318 10090 + 2:152745707-152746307 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverLungPlacentaTestisENSMUST00000121985
Transcript ID Bladder Liver Lung Placenta Testis
ENSMUST00000121985 0.015±0.00 0.015±0.00 0.278±0.12 0.104±0.07 0.197±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0001A1 CIL_0001A1_0002 CGP 2:152736251-152765037

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264052 SP100-001 protein_coding Homo_sapiens 0 396
ENST00000403495 HMGB1P17-001 processed_pseudogene Homo_sapiens 0 287
ENST00000453854 HMGB1P15-001 processed_pseudogene Homo_sapiens 0 322
ENST00000468402 HMGB1P25-001 processed_pseudogene Homo_sapiens 0 263
ENST00000502802 HMGB1P3-001 processed_pseudogene Homo_sapiens 0 462
ENST00000569046 RP11-673C5.1-001 processed_pseudogene Homo_sapiens 0 547

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