C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122067 Sept4-009 ENSMUSG00000020486 10090 + 11:87578424-87590537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000122067
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000122067 14.835±3.94 3.481±0.00 12.424±7.33 5.875±0.17 4.095±1.37 5.016±0.04 7.999±0.75 2.358±0.73 60.249±4.58 2.110±0.44 3.886±1.53 9.587±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0007049 IEA cell cycle
GO:0007286 IMP spermatid development
GO:0007420 IMP brain development
GO:0030382 IMP sperm mitochondrion organization
GO:0031105 IEA septin complex
GO:0031514 IMP motile cilium
GO:0036126 IDA sperm flagellum
GO:0042995 IDA cell projection
GO:0048240 IMP sperm capacitation
GO:0051301 IEA cell division
GO:0097227 IDA sperm annulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317256 SEPT4-006 protein_coding Homo_sapiens 0 1280
ENST00000317268 SEPT4-008 protein_coding Homo_sapiens 0 1280
ENST00000393086 SEPT4-201 protein_coding Homo_sapiens 0 1280
ENST00000412945 SEPT4-001 protein_coding Homo_sapiens 0 1280
ENST00000426861 SEPT4-004 protein_coding Homo_sapiens 0 669
ENST00000457347 SEPT4-002 protein_coding Homo_sapiens 0 1280
ENST00000577440 SEPT4-005 retained_intron Homo_sapiens 0 1282
ENST00000577729 SEPT4-022 protein_coding Homo_sapiens 0 784
ENST00000578131 SEPT4-021 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000579371 SEPT4-013 protein_coding Homo_sapiens 0 1530
ENST00000580796 SEPT4-016 retained_intron Homo_sapiens 0 1280
ENST00000580809 SEPT4-003 protein_coding Homo_sapiens 0 689
ENST00000580844 SEPT4-012 protein_coding Homo_sapiens 0 1280
ENST00000581615 SEPT4-026 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000581921 SEPT4-018 processed_transcript Homo_sapiens 8e-33 143
ENST00000582270 SEPT4-014 retained_intron Homo_sapiens 0 616
ENST00000583114 SEPT4-017 protein_coding Homo_sapiens 0 1280
ENST00000583273 SEPT4-010 retained_intron Homo_sapiens 0 1280
ENST00000583291 SEPT4-020 protein_coding Homo_sapiens 0 427
ENST00000584488 SEPT4-011 retained_intron Homo_sapiens 0 1282
ENST00000584528 SEPT4-023 processed_transcript Homo_sapiens 7e-17 92
ENST00000584789 SEPT4-007 retained_intron Homo_sapiens 0 294
ENST00000585170 SEPT4-015 retained_intron Homo_sapiens 0 243

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