C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13487
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122240 Gm13487-001 ENSMUSG00000083449 10090 - 2:50522124-50522987 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000122240
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122240 0.087±0.00 0.010±0.00 0.038±0.03 0.447±0.25 0.083±0.02 0.071±0.06 0.105±0.00 0.020±0.00 0.027±0.00 0.056±0.03 0.067±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DZ CIL_0007DZ_0002 CGP 2:50279881-51149111

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323981 TAF1D-002 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000448108 TAF1D-001 protein_coding Homo_sapiens 0 315
ENST00000526015 TAF1D-004 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000527068 TAF1D-010 retained_intron Homo_sapiens 0 248
ENST00000527169 TAF1D-003 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000534770 TAF1D-008 nonsense_mediated_decay Homo_sapiens 0 265

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