C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuritin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122286 Nrn1-002 ENSMUSG00000039114 10090 - 13:36726458-36730668 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaENSMUST00000122286
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta
ENSMUST00000122286 1.438±0.00 0.892±0.49 1.332±0.63 1.023±0.57 1.148±0.00 0.103±0.01 1.804±0.00 0.379±0.00 7.257±2.64 0.386±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005H CIL_00005H_0002 CGP 13:36117411-36734477
CIL_0003SA CIL_0003SA_0002 CGP 13:36725625-37050244

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007409 ISO axonogenesis
GO:0032281 IDA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244766 NRN1-001 protein_coding Homo_sapiens 0 773
ENST00000495850 NRN1-002 processed_transcript Homo_sapiens 0 867
ENST00000616243 NRN1-201 protein_coding Homo_sapiens 0 773
ENST00000622188 NRN1-202 protein_coding Homo_sapiens 0 771

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