C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13157
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122309 Gm13157-001 ENSMUSG00000078495 10090 - 4:147754199-147775833 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000122309
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000122309 0.422±0.00 0.428±0.00 0.153±0.00 0.041±0.00 0.172±0.08 0.049±0.01 0.137±0.00 0.182±0.05 0.568±0.27 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0002 VISTA 4:147665245-148272946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228289 ZNF268-002 protein_coding Homo_sapiens 3e-33 148
ENST00000250076 ZNF232-001 protein_coding Homo_sapiens 0.000000000000001 90
ENST00000282869 ZNF117-002 protein_coding Homo_sapiens 0 220
ENST00000291598 ZNF583-201 protein_coding Homo_sapiens 9e-37 159
ENST00000305127 ZNF182-201 protein_coding Homo_sapiens 0 285
ENST00000308031 ZNF471-001 protein_coding Homo_sapiens 9.94922e-44 183
ENST00000328550 ZNF571-201 protein_coding Homo_sapiens 4e-22 111
ENST00000330619 ZNF470-001 protein_coding Homo_sapiens 3e-31 143
ENST00000332591 ZNF484-002 protein_coding Homo_sapiens 0 252
ENST00000333201 ZNF583-001 protein_coding Homo_sapiens 2e-36 159
ENST00000334564 ZNF480-005 protein_coding Homo_sapiens 0 276
ENST00000335090 ZNF480-003 protein_coding Homo_sapiens 0 276
ENST00000338637 ZNF81-201 protein_coding Homo_sapiens 2.00386e-43 183
ENST00000358744 ZNF571-003 protein_coding Homo_sapiens 2e-22 111
ENST00000372699 ZNF684-001 protein_coding Homo_sapiens 2e-27 128
ENST00000375495 ZNF484-001 protein_coding Homo_sapiens 0 252
ENST00000376943 ZNF182-001 protein_coding Homo_sapiens 0 285
ENST00000376954 ZNF81-001 protein_coding Homo_sapiens 2.00386e-43 183
ENST00000391709 ZNF470-201 protein_coding Homo_sapiens 2e-31 143
ENST00000395505 ZNF484-201 protein_coding Homo_sapiens 0 252
ENST00000395506 ZNF484-202 protein_coding Homo_sapiens 0 252
ENST00000396965 ZNF182-002 protein_coding Homo_sapiens 0 285
ENST00000414387 ZNF674-004 protein_coding Homo_sapiens 0 200
ENST00000451802 ZNF571-001 protein_coding Homo_sapiens 2e-22 111
ENST00000468240 ZNF480-007 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000490272 ZNF480-002 protein_coding Homo_sapiens 0 276
ENST00000493756 ZNF684-005 processed_transcript Homo_sapiens 1e-27 128
ENST00000523374 ZNF674-001 protein_coding Homo_sapiens 0 200
ENST00000536435 ZNF268-001 protein_coding Homo_sapiens 1e-32 148
ENST00000536899 ZNF268-003 protein_coding Homo_sapiens 3e-33 148
ENST00000541009 ZNF268-012 protein_coding Homo_sapiens 3e-33 148
ENST00000542986 ZNF268-009 protein_coding Homo_sapiens 3e-33 148
ENST00000570486 ZNF232-002 nonsense_mediated_decay Homo_sapiens 0.000000000000001 90
ENST00000573015 ZNF232-003 nonsense_mediated_decay Homo_sapiens 8e-16 90
ENST00000574735 ZNF232-004 retained_intron Homo_sapiens 9e-16 90
ENST00000575898 ZNF232-005 protein_coding Homo_sapiens 8e-16 90
ENST00000585612 ZNF583-006 processed_transcript Homo_sapiens 1e-20 106
ENST00000591537 ZNF471-002 protein_coding Homo_sapiens 9.94922e-44 183
ENST00000593133 ZNF571-002 protein_coding Homo_sapiens 3e-22 111
ENST00000595962 ZNF480-001 protein_coding Homo_sapiens 0 276
ENST00000620222 ZNF117-202 protein_coding Homo_sapiens 0 220

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